PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00356.1.g00120.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 299aa    MW: 31901.8 Da    PI: 8.4334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00356.1.g00120.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-20148198255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp +ng  +r++lg+++tae+Aa a+++a+ +++g
  Zpz_sc00356.1.g00120.1.am.mk 148 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDTAEDAALAYDRAAYRMRG 198
                                   8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.77E-30147206No hitNo description
Gene3DG3DSA:3.30.730.104.9E-32147206IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-23148208IPR016177DNA-binding domain
PfamPF008472.5E-14148198IPR001471AP2/ERF domain
SMARTSM003802.2E-38148212IPR001471AP2/ERF domain
PROSITE profilePS5103224.25148206IPR001471AP2/ERF domain
PRINTSPR003671.0E-10149160IPR001471AP2/ERF domain
PRINTSPR003671.0E-10172188IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MLLKPASEAL VLDSIRQPLL EESAAVVKKE EATTRPGYRR SASFESLVAD QWSDSLPFRT  60
DDADDMVVFG ALRDAFAYGW LPDGSFAAVK PEPLPSPDCS SCSYDGSYSF GVAEPPLTPG  120
SSCTTDQATP KRDEQEQAAA AAVARGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTYD  180
TAEDAALAYD RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA AKRPSPKPAT SSDSSSFSSS  240
SSSSGSPKRR KRGEAAAATM SLPLVPPPSQ LSRPAQPWFP AVPAEQVVAI APRVEQLVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-40144211168ATERF1
3gcc_A7e-40144211168ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956406.11e-115PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404792e-59ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A0A9QX361e-120A0A0A9QX36_ARUDO; Uncharacterized protein
STRINGSi030692m1e-115(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-38ethylene responsive element binding factor 1